研究業績
論文（2005年以降）
界面微生物工学
- M. Ishikawa, H. Nakatani and K. Hori; Growth phase-dependent production of the adhesive nanofiber protein AtaA in Acinetobacter sp. Tol 5, J. Biosci. Bioeng. 135, (2023)
- S. Yoshimoto, S. Aoki, Y. Ohara, M. Ishikawa, A. Suzuki, D. Linke, A. Lupas, K. Hori; Identification of the adhesive domain of AtaA from Acinetobacter sp. Tol 5 and its application in immobilizing Escherichia coli, Front. Bioeng. Biotechnol. 10, (2022)
- H. Nakatani, N. Yamada, N. Hashimoto, F. Okazaki, T. Arakawa, Y. Tamaru and K. Hori; Perturbation by Antimicrobial Bacteria of the Epidermal Bacterial Flora of Rainbow Trout in Flow-Through Aquaculture, Biology. 11, (2022) 1249
- M. Ishikawa and K. Hori; Complete Genome Sequence of the Highly Adhesive Bacterium
- Acinetobacter
sp. Strain Tol 5, Microbiol Resour Announc. 10, (2021) e00567-21
- S. Ishii, S. Yoshimoto and K. Hori; Single-cell adhesion force mapping of a highly sticky bacterium in liquid, J Colloid Interface Sci. 606, (2022) 628-634
- Y. Furuichi, S. Yoshimoto, T. Inaba, N. Nomura, and K. Hori; Process Description of an Unconventional Biofilm Formation by Bacterial Cells Autoagglutinating through Sticky, Long, and Peritrichate Nanofibers, Environ. Sci. Technol. 54, (2020) 2520-2529
- K. Noba, M. Ishikawa, A. Uyeda, T. Watanabe, T. Hohsaka, S. Yoshimoto, T. Matsuura and K. Hori; Bottom-up creation of an artificial cell covered with the adhesive bacterionanofiber protein AtaA, J. Am. Chem. Soc. 141, (2019) 19058-19066
- [Cover picture]
S. Aoki, S. Yoshimoto, M. Ishikawa, D. Linke, A. Lupas and K. Hori; Native display of a huge homotrimeric protein fiber on the cell surface after precise domain deletion, J. Biosci. Bioeng. 129, (2020) 412-417.
- Y. Ohara, S. Yoshimoto and K. Hori; Control of AtaA-mediated bacterial immobilization by casein hydrolysates, J. Biosci. Bioeng. 128, (2019) 544-550.
- Y. Furuichi, K. Iwasaki and K. Hori; Cell behavior of the highly sticky bacterium
- Acinetobacter
sp. Tol 5 during adhesion in laminar flows, Sci. Rep. 8, 8285 (2018).
- H. Nakatani, N. Ding, Y. Ohara and K. Hori; Immobilization of Enterobacter aerogenes by a Trimeric Autotransporter Adhesin, AtaA and Its Application to Biohydrogen Production, Catalysts 8, 159 (2018).
- H. Nakatani, J. Kanie and K. Hori; On‐fiber display of a functional peptide at sites distant from the cell surface using a long bacterionanofiber of a trimeric autotransporter adhesin, Biotechnol. Bioeng. 239-249 (2018).
- S. Yoshimoto, Y. Ohara, H. Nakatani and K. Hori; Reversible bacterial immobilization based on the salt-dependent adhesion of the bacterionanofiber protein AtaA, Microb. Cell Factories 16, (2017), 123
- J. C. Leo, P. Oberhettinger, S. Yoshimoto, D. B. R. K. G. Udatha, J. P. Morth ,M. Schütz, K. Hori and D. Linke; Secretion of the Intimin Passenger Domain Is Driven by Protein Folding, J. Biol. Chem. 291(2016) 20096-20112 DOI 10.1074/jbc.M116.731497
- S. Yoshimoto, H. Nakatani, K. Iwasaki and K. Hori; An Acinetobacter trimeric autotranspoter adhesin reaped from cells exhibits its nonspecific stickiness via a highly stable 3D strucuture, Sci. Rep. 6, 28020 (2016) DOI:10.1038/srep28020
- M. Ishikawa, S. Yoshimoto, A. Hayashi, J. Kanie and K.Hori; Discovery of a novel periplasmic protein that forms acomplex with a trimeric autotransporter adhesin and Peptidoglycan, Mol Microbiol (2016) 101(3), 394-410（DOI: 10.1111/mmi.13398）
- K. Koiwai, M. D. Hartmann, D. Linke, A. N. Lupas and K. Hori; Structural basis for toughness and flexibility in the C-terminal Passenger domain of an Acinetobacter trimeric autotranspoter Adhesin, J. Biol. Chem. 291(2016) 3705-3724
- K. Hori, Y. Ohara, M. Ishikawa and H. Nakatani; Effectiveness of direct immobilization of bacterial cells onto material surfaces using the bacterionanofiber protein AtaA, Applied Microbiology and Biotechnology. 99 (2015) 5025-5032.
- [Spotlighted Article]
M. Ishikawa, K. Shigemori and K. Hori; Application of the adhesive bacterionanofiber AtaA to a novel microbial immobilization method for the production of indigo as a model chemical, Biotechnol. Bioeng. 111 (2014) 16-24.DOI: 10.1002/bit.25012
- H. Liu, M. Ishikawa, S. Matsuda, Y. Kimoto, K. Hori, K. Hashimoto and S. Nakanishi; Extracellular electron transfer of a highly adhesive and metabolically versatile bacterium, Chemphyschem, 14 (2013)2407-12 DOI: 10.1002/cphc.201300207
- M. Ishikawa and K. Hori; A new simple method for introducing an unmarked mutation into a large gene of non-competent Gram-negative bacteria by FLP/FRT recombination, BMC Microbiol. 13 (2013) 86
- M. Ishikawa, H. Nakatani, K. Hori; AtaA, a New Member of the Trimeric Autotransporter Adhesins from Acinetobacter sp. Tol 5 Mediating High Adhesiveness to Various Abiotic Surfaces, PLOS ONE, 7 (2012) e48830
- S. Matsumoto, A. Ohtaki and K. Hori; Carbon Fiber as an Excellent Support Material for Wastewater Treatment Biofilms, Environ. Sci. Technol. 46 (2012) 10175-181
- M. Ishikawa, K. Shigemori, A. Suzuki and K. Hori; Evaluation of adhesiveness of Acinetobacter sp. Tol 5 to abiotic surfaces, J. Biosci. Bioeng. 113,(2012) 719-725.
- K. Hori, M. Ishikawa, M. Yamada, A. Higuchi, Y. Ishikawa, and H. Ebi; Production of peritrichate bacterionanofibers and their proteinaceous components by Acinetobacter sp. Tol 5 cell affected by growth substrates, J. Biosci. Bioeng. 111, (2010) 31-36.
- 樋口愛介，堀田康明，山本宏治，堀 克敏; 改良ネガティブ染色法によるAcinetobacter属細菌Tol5株細胞上の3種粘着性ナノファイバーの識別; 医学生物学電子顕微鏡技術学会誌, 23, (2009) 9-14.
- K. Hori, N. Hiramatsu, M. Nannbu, K. Kanie, M. Okochi, H. Honda, and H. Watanabe; Drastic change in cell surface hydrophobicity of a new bacterial strain, Pseudomonas sp. TIS1-127, induced by growth temperature and its effects on the toluene-conversion rate, J.Biosci. Bioeng. 107, (2009) 250-255.
- H. Watanabe, Y. Tanji, H. Unno, K. Hori; Rapid conversion of toluene by an Acinetobacter sp. Tol 5 mutant showing monolayer adsorption to oil-water interface, J. Biosci. Bioeng. 106, (2008) 226-230.
- K. Hori, H. Watanabe, S. Ishii, Y. Tanji, and H. Unno; Monolayer Adsorption of a “Bald” Mutant of the Highly Adhesive and Hydrophobic Bacterium Acinetobacter sp. Strain Tol 5 to a Hydrocarbon Surface, Appl. Environ. Microbiol. 74, (2008) 2511-2517.
- S. Ishii, S. Miyata, Y. Hotta, K. Yamamoto, H. Unno, and K. Hori; Formation of filamentous appendages by Acinetobacter sp. Tol 5 to adhere to solid surfaces, J. Biosci. Bioeng. 105, (2008) 20-25.
- S. Ishii, H. Unno, S. Miyata, K. Hori; Effect of cell appendages on the adhesion property of a highly adhesive bacterium, Acinetobacter sp. Tol 5, Biosci. Biotech. Biochem. 70, (2006) 2635-2640.
- S. Ishii, T. Kosaka, K. Hori, Y. Hotta, and K. Watanabe; Coaggregation Facilitates Interspecies Hydrogen Transfer between Pelotomaculum thermopropionicum and Methanothermobacter thermautotrophicus, Appl. Environ. Microbiol. 71, (2005) 7838-7845.
廃水処理・環境浄化
- M. Ishikawa, T. Kojima, and K. Hori; Development of a Biocontained Toluene-Degrading Bacterium for Environmental Protection, Microbiol Spectr. 9, (2021) e00259-21.
- Y.-Y. Chen, Y. Soma, M. Ishikawa, M. Takahashi, Y. Izumi, T. Bamba and K. Hori; Metabolic alteration of Methylococcus capsulatus str. Bath during a microbial gas-phase reaction, Biores. Technol. 330, (2021) 125002.
- H. Nakatani and K. Hori; Establishing a Percutaneous Infection Model Using Zebrafish and a Salmon Pathogen, Biology. 10, (2021) 166.
- Y.-Y. Chen, M. Ishikawa, R, Suzuki, H. Ito, T. Kamachi and K. Hori; Evaluation of methane degradation performance in microbial gas-phase reactions using effectively immobilized methanotrophs, Biochem. Eng. J. 154, (2020) 107441.
- A. Usami, M. Ishikawa and K. Hori; Gas-phase bioproduction of a high-value-added monoterpenoid (E)-geranic acid by metabolically engineered Acinetobacter sp. Tol 5, Green Chem. 22, (2020) 1258-1268.
- M. Ishikawa, S. Yokoe, S. Kato, and K. Hori; Efficient Counterselection for Methylococcus capsulatus (Bath) by Using a Mutated pheS Gene, Appl. Environ. Microbiol. 84, e01875-18 (2018).
- K. Tanaka, S. Yokoe, K. Igarashi, M. Takashino, M. Ishikawa, K. Hori, S. Nakanishi, and S. Kato; Extracellular Electron Transfer via Outer Membrane Cytochromes in a Methanotrophic Bacterium Methylococcus capsulatus (Bath), Front. Microbiol.9, 2905 (2018).
- M. Ishikawa, Y. Tanaka, R. Suzuki, K. Kimura, K. Tanaka, K. Kamiya, H. Ito, S. Kato, T. Kamachi, K. Hori, and S. Nakanishi; Real-time monitoring of intracellular redox changes in Methylococcus capsulatus (Bath) for efficient bioconversion of methane to methanol, Biores. Technol. 241, (2017) 1157-1161.
- D. Okamura, Y. Mori, T. Hashimoto, and K. Hori; Effects of microbial degradation of biofoulants on microfiltration membrane performance in a membrane bioreactor, Environ. Sci. Technol. 44 (2010) 8644-8648.
- D. Okamura, Y. Mori, T. Hashimoto, and K. Hori; Identification of biofoulant of membrane bioreactors insoluble microbial products, Water Res. 43 (2009) 4356-4362.
- H. Matsuoka, A. Miura, and K. Hori; Symbiotic effects of a lipase-secreting bacterium, Burkholderia arboris SL1B1, and a glycerol-assimilating yeast, Candida cylindracea SL1B2, on triacylglycerol degradation, J. Biosci. Bioeng. 107, (2009) 401-408.
- K. Miyanaga, S. Takano, Y. Morono, K. Hori, H. Unno and Y. Tanji; Optimization of distinction between viable and dead cells by fluorescent staining method and its application to bacterial consortia, Biochem. Eng. J. 37, (2007) 56-61.
- Y. Morono, H. Unno, K. Hori; Correlation of TCE cometabolism with growth characteristics on aromatic substrates in toluene-degrading bacteria, Biochem. Eng. J.31 (2006) 173-179.
- K. Hori, J. Mii, Y. Morono, Y. Tanji, and H. Unno; Kinetic analyses of trichloroethylene cometabolism by toluene-degrading bacteria harboring a tod homologous gene, Biochem. Eng. J. 26, (2005) 59-64.5
環境生物工学関連論文
- H. Ito, K. Yoshimori, M. Ishikawa, K. Hori and T. Kamachi; Switching Between Methanol Accumulation and Cell Growth by Expression Control of Methanol Dehydrogenase in Methylosinus trichosporium OB3b Mutant, Frontiers in Microbiology. 12. (2021) 639266.
- K. Hori, R. Ichinohe, H. Unno, and S. Marsudi; Simultaneous syntheses of polyhydroxyalkanoates and rhamnolipids by Pseudomonas aeruginosa IFO3924 at various temperatures and from various fatty acids, Biochem. Eng. J. 53 (2011) 196-202.
- K. Hori, M. Abe, and H. Unno; Production of triacylglycerol and poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by the toluene-degrading bacterium Rhodococcus aetherivorans IAR1, J. Biosci. Bioeng. 108 (2009) 319-324.
- K. Hori, A. Kobayashi, H. Ikeda, H. Unno; Rhodococcus aetherivorans IAR1, a new bacterial strain synthesizing poly(3-hydroxybutyrate-co-3-hydroxyvalerate) from toluene, J. Biosci. Bioeng. 107, (2009) 145-150.
- S. Marsudi, H. Unno, K. Hori; Palm oil utilization for simultaneous production of polyhydroxyalkanaotes and rhamnolipids by Pseudomonas aeruginosa, Appl. Microbiol. Biotechnol. 78, (2008) 955-961.
- B-I. Sang, W-K. Lee, K. Hori, and H. Unno; Purification and Characterization of Fungal Poly(3-hydroxybutyrate) Depolymerase from Paecilomyces lilacinus F4-5 and Enzymatic Degradation of Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) Film, World J. Microbiol.Biotechnol. 22, (2006) 51-57.
その他の論文
- [Cover picture]
A. Usami, M. Ishikawa, and K. Hori; Heterologous expression of geraniol dehydrogenase for identifying the metabolic pathways involved in the biotransformation of citral by Acinetobacter sp. Tol 5, Biosci. Biotechnol. Biochem. 1-9 (2018).
- K. Koiwai,T. Kubota, N. Watanabe, K. Hori, O. Koiwai and H. Masai; Definition of the transcription factor TdIF1 consensus-binding sequence through genomewide mapping of its binding sites, Genes to Cells 20 (2015) 242-254.
- T. Kubota, O. Koiwai, K. Hori, N. Watanabe, K. Koiwai; TdiF1 recognizes a specific DNA sequence through its helix-turn-helix and AT-hook motifs to regulate gene transcription, PLoS ONE 8 (2013) e66710.
レビュー・総説
- K. Hori, S. Yoshimoto, T. Yoshino, T. Zako, G. Hirao, S. Fujita, C. Nakamura, A. Yamagishi, N. Kamiya; Recent advances in research on biointerfaces: From cell surfaces to artificial interfaces, J. Biosci. Bioeng. (2022)
- 堀 克敏；バイオコントロールによる高濃度油脂含有排水のハイパフォーマンス処理；環境バイオテクノロジー学会誌17 (2017) 3-8.
- [Invited Review Paper]
H. Nakatani and K. Hori; Cell surface protein engineering for high-performance whole-cell catalysts, Front. Chem. Sci. Eng. 11 (1), (2017), 46-57. DOI 10.1007/s11705-017-1609-3
- 堀 克敏; バイオフィルム・微生物付着の工学利用; 膜, 42, (2017), 54-59.
- 石川聖人、堀 克敏; 細胞表層タンパク質の合成生物学; 生物工学会誌, 94, (2016), 701-703.
- 堀 克敏；細菌接着タンパク質AtaA分子の特性と応用；バイオサイエンスとインダストリー, Vol.74,No.5 (2016) 417-419.
- 堀 克敏；細菌の持つ接着ナノファイバータンパク質AtaA；バイオサイエンスとインダストリー, Vol.74,No.5 (2016) 380-381.
- 堀 克敏;バイオフィルムを利用した界面微生物工学; 化学療法の領域Vol.31, No11(2015) 88-96
- 松本 慎也、堀 克敏; 炭素繊維が微生物を集めて水を浄化するメカニズム; 繊維機械学会誌66, (2013)29-33
- 堀 克敏; 微生物付着・バイオフィルムの制御と応用から界面微生物工学へ; オレオサイエンス11, (2012)19-24.
- 堀 克敏；バクテリオナノファイバー蛋白質の機能を基盤とする界面微生物プロセスの構築；化学工学, 76, (2012), 4, 212-214
- 堀 克敏；界面微生物工学によるグリーン・イノベーションを目指して；化学工業 63, (2012), 1, 70-74
- 堀 克敏；バクテリオナノファイバーによる細菌の細胞接着；Bacterial Adherence & Biofilm, 25 , (2011), 1-7
- [Invited Review Paper]
K. Hori, and S. Matsumoto; Bacterial adhesion: From mechanism to control, Biochem. Eng. J. 48 (2010) 424-434.
- 堀 克敏、石川聖人；細菌ナノファイバーによる微生物の表面付着；環境バイオテクノロジー学会誌10 (2010) 3-7.
- 堀 克敏；微生物の付着機構；日本接着学会誌，46, (2010), 70-75.
- 堀 克敏；バクテリオナノファイバーの細胞接着機能と応用；高分子 60, (2011), 10, 747-748
- 堀 克敏；細菌ナノファイバーの構造と細胞付着機構；バイオサイエンスとインダストリー, 67, (2009), 409-412.
- 堀 克敏；粘着性微生物の構造・機能解析の現状；機械の研究, 61, (2009), 783-788.
- 堀 克敏；微生物の付着に働く粘着性細菌ナノファイバー；ケミカルエンジニヤリング,53, (2008), 830-835.
- 堀 克敏；環境汚染物質の微生物分解と無害化；分離技術, 36, (2006) 79-83.
- 堀 克敏、石井俊一、海野 肇; 細菌に強付着性をもたらす新規細胞表層構造; 医学生物学電子顕微鏡技術学会誌 20, (2006) 3-5.
- 石井俊一、堀 克敏、堀田康明、渡辺一哉; メタン発酵共生微生物群が形成する凝集体のSEM観察; 医学生物学電子顕微鏡技術学会誌20, (2006) 6-8.
- 堀 克敏；強付着性細菌が有するアンカー様表層構造物；バイオサイエンスとインダストリー, 63, (2005) 295-296.
- 海野 肇、堀 克敏; ＰＨＢＶフィルムの土壌中でのオンサイト分解におけるカビの寄与; 高分子加工, 52, (2003) 277-282.
- 海野 肇、堀 克敏; 微生物機能を利用した環境保全技術―水環境を中心として―; 化学装置, 別冊, (2003) 7-11.
- 海野 肇、堀 克敏; 微生物機能を利用した環境保全技術―汚染防止・浄化システムの現状と研究動向―; 化学装置, 44, (2002) 160-166.
- 堀 克敏; 木炭および生物木炭の水質浄化機能; バイオサイエンスとインダストリー, 59, (2001) 27-30.
- 海野 肇，丹治保典，堀 克敏; 化学プロセスにおける塩素フローの解析と塩素化合物量の低減; ケミカルエンジニヤリング, 45, (2000) 69-77.
- 海野 肇, 堀 克敏; 微生物による環境浄化; 化学と教育, 12, (2000) 812-815.
- 堀 克敏; 木炭・微生物の複合機能による水質浄化; ケミカルエンジニヤリング, 43, (1998) 29-33.
- 堀 克敏; 有機塩素化合物の微生物分解; 生物工学会誌, 76, (1998) 437.
著書
- 植田充美, 渡邊幸夫, 堀 克敏, 田丸 浩, 岡崎文美; バイオテクノロジーシリーズ「細胞表層工学の進展」 シーエムシー出版, (2020) p209-218.
- K. Hori, H. Unno; Integrated Production and Separation, Comprehensive Biotechnology(Third Edition), (2019) p651-662.
- 堀 克敏; 微生物ナノファイバーを用いた可逆的な微生物細胞固定化技術;『細胞・生体分子の固定化と機能発現』 シーエムシー出版, (2018)
- K. Hori and H. Unno; Integrated production and separation, In Reference Module in Life Sciences, Elsevier, (2017)
- K. Hori; Adhesion of Bacteria ; 『Biofilm and Materials Science』Hideyuki Kanematsu・Dana M. Barry editors, Springer, (2015) p23-34.
- 堀 克敏; 水素エネルギー研究の基礎;『次世代のバイオ水素エネルギー』日本化学会編，化学同人，(2014) p26-34.
- 天尾 豊，三宅 淳，南後 守，堀 克敏; バイオ水素エネルギー開発の新しい展開をめざして;『次世代のバイオ水素エネルギー』日本化学会編，化学同人，(2014) p2-11.
- 丁 楠、中谷 肇、堀 克敏; 暗発酵による水素生産;『光合成のエネルギー利用と環境応用』シーエムシー出版，(2014) p104-111.
- 堀 克敏（監著）;『
低コスト・ハイパフォーマンス技術による水処理革命』コロナ社，(2013)
- K. Hori and H. Unno; Bioreactions and Bioreactor Operation | Integrated production and separation, in Murray Moo-Young (ed.), “Comprehensive Biotechnology”, Second Edition, volume 2, Elsevier, (2011) , pp.579-590.
- 堀 克敏; 付着機構の解明と工学的応用可能性;『バイオフィルムの基礎と制御』エヌ・ティー・エス，(2008) p.65-80.
- 堀 克敏; 環境をきれいにするタンパク質;『トコトンやさしいタンパク質の本』東京工業大学大学院生命理工学研究科編，日刊工業新聞社，(2007) p.24-25.
- 堀 克敏; 木炭および生物木炭の水質浄化機能;『微生物固定化法による水処理』エヌ・ティー・エス，(2000) p.37-45.
- 土肥 義治、堀 克敏; 微生物ポリエステル（分担）; 『生分解性プラスチックハンドブック』土肥義治編，エヌ・ティー・エス， (1995) p.178-192.
